Note
Click here to download the full example code
Plotting ResultsΒΆ
Code example to plot the results after the experiment.
Out:
social_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_block_model_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_block_model_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_block_model_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
social_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
social_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
biology_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_gf_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_rand_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_pa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_lap_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_hope_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_cn_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_aa_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_watts_strogatz_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_barabasi_albert_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_powerlaw_cluster_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_random_geometric_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_duplication_divergence_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_hyperbolic_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_r_mat_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_waxman_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
internet_stochastic_kronecker_graph_sdne_lp_rw_data_hyp.h5 not found. Ignoring data set
try: import cPickle as pickle
except: import pickle
import matplotlib
import matplotlib.pyplot as plt
import itertools
from matplotlib import rc
import numpy as np
import pandas as pd
import seaborn
font = {'family': 'serif', 'serif': ['computer modern roman']}
rc('text', usetex=False)
rc('font', weight='bold')
rc('font', size=8)
rc('lines', markersize=2.5)
rc('lines', linewidth=0.5)
rc('xtick', labelsize=6)
rc('ytick', labelsize=6)
rc('axes', labelsize='small')
rc('axes', labelweight='bold')
rc('axes', titlesize='small')
rc('axes', linewidth=1)
plt.rc('font', **font)
seaborn.set_style("darkgrid")
import pdb
def plot_benchmark(domains, graph_attrs, attr_defaults, methods, graph_names, s_sch='rw'):
df_all = pd.DataFrame()
for d, m , g in itertools.product(*[domains, methods, graph_names]):
try:
df = pd.read_hdf(path+
"%s_%s_%s_lp_%s_data_hyp.h5" % (d, g, m, s_sch),
"df"
)
except:
print('%s_%s_%s_lp_%s_data_hyp.h5 not found. Ignoring data set' % (d, g, m, s_sch))
continue
df["Domain"], df["Method"], df["Graph"] = d, m, g
df_all = df_all.append(df).reset_index()
df_all = df_all.drop(['index'], axis=1)
if df_all.empty:
return
df_all = df_all.drop(['dia'], axis=1)
plot_shape = (len(domains), len(graph_attrs))
fin1, axarray1 = plt.subplots(len(domains), len(graph_attrs), figsize=(7, 4), sharex='col', sharey='row')
data_idx = 0
gfs_score = {}
for dom in domains:
gfs_score[dom] = {m: 0 for m in methods}
n_attr = 0
for attr in graph_attrs:
plot_idx = np.unravel_index(data_idx, plot_shape)
data_idx += 1
try:
rem_attrs = list(set(graph_attrs) - {attr})
df_grouped = df_all[df_all["Domain"]==dom]
for rem_attr in rem_attrs:
df_grouped = df_grouped[df_grouped[rem_attr]==attr_defaults[rem_attr]]
df_grouped = df_grouped[[attr, "Round Id", "LP MAP", "Method", "Graph"]]
print(df_grouped.head())
df_grouped['LP MAP'] = df_grouped['LP MAP'].astype('float')
df_grouped = df_grouped.groupby([attr, "Round Id", "Method", "Graph"]).mean().reset_index()
except TypeError:
df_trun[hyp_key_ren + "2"] = \
df_trun[hyp_key_ren].apply(lambda x: str(x))
df_trun[hyp_key_ren] = df_trun[hyp_key_ren + "2"].copy()
df_trun = df_trun.drop([hyp_key_ren + "2"], axis=1)
df_grouped = df_trun.groupby([hyp_key_ren, "Round Id", "Data"]).max().reset_index()
df_grouped['unit']=df_grouped.apply(lambda x:'%s_%s' % (x['Round Id'],x['Graph']),axis=1)
df_grouped = df_grouped.drop(['Round Id', "Graph"], axis=1)
m_scores = dict(df_grouped.groupby(["Method"])["LP MAP"].mean())
n_attr += 1
gfs_score[dom] = {m: m_scores[m] + gfs_score[dom][m] for m in methods}
ax = seaborn.tsplot(time=attr, value="LP MAP",
unit="unit", condition="Method", legend=False,
data=df_grouped, ax=axarray1[plot_idx[0], plot_idx[1]])
if not plot_idx[1]:
ax.set_ylabel(dom)
if plot_idx[1]:
ax.set_ylabel('')
if plot_idx[0] < len(domains) - 1:
ax.set_xlabel('')
attr_values = df_grouped[attr].unique()
l_diff = attr_values[-1] - attr_values[-2]
f_diff = attr_values[1] - attr_values[0]
l_f_diff_r = l_diff / f_diff
if l_f_diff_r > 1:
log_base = pow(l_f_diff_r, 1.0 / (len(attr_values) - 2))
ax.set_xscale('log', basex=round(log_base))
marker = ["o", "s", "D", "^", "v", "8", "*", "p", "1", "h"]
for line_i in range(len(ax.lines)):
ax.lines[line_i].set_marker(marker[line_i])
gfs_score[dom] = {m: gfs_score[dom][m]/n_attr for m in methods}
print(gfs_score)
plt.savefig(
'benchmark.pdf',
dpi=300, format='pdf', bbox_inches='tight'
)
plt.show()
def plot_benchmark_individual(domains, graph_attrs, attr_defaults, methods, graph_names, graph_short, s_sch='rw'):
df_all = pd.DataFrame()
for d, m , g in itertools.product(*[domains, methods, graph_names]):
try:
df = pd.read_hdf(path+
"%s_%s_%s_lp_%s_data_hyp.h5" % (d, g, m, s_sch),
"df"
)
except:
print('%s_%s_%s_lp_%s_data_hyp.h5 not found. Ignoring data set' % (d, g, m, s_sch))
continue
df["Method"], df["Graph"] = m, g
df_all = df_all.append(df).reset_index()
df_all = df_all.drop(['index'], axis=1)
if df_all.empty:
return
df_all = df_all.drop(['dia'], axis=1)
plot_shape = (len(graph_names), len(graph_attrs))
fin1, axarray1 = plt.subplots(len(graph_names), len(graph_attrs), figsize=(7, 4), sharex='col', sharey='row')
data_idx = 0
for graph in graph_names:
for attr in graph_attrs:
plot_idx = np.unravel_index(data_idx, plot_shape)
data_idx += 1
try:
rem_attrs = list(set(graph_attrs) - {attr})
df_grouped = df_all[df_all["Graph"]==graph]
for rem_attr in rem_attrs:
df_grouped = df_grouped[df_grouped[rem_attr]==attr_defaults[rem_attr]]
df_grouped = df_grouped[[attr, "Round Id", "LP MAP", "Method"]]
print(df_grouped.head())
df_grouped['LP MAP'] = df_grouped['LP MAP'].astype('float')
df_grouped = df_grouped.groupby([attr, "Round Id", "Method"]).mean().reset_index()
except TypeError:
df_trun[hyp_key_ren + "2"] = \
df_trun[hyp_key_ren].apply(lambda x: str(x))
df_trun[hyp_key_ren] = df_trun[hyp_key_ren + "2"].copy()
df_trun = df_trun.drop([hyp_key_ren + "2"], axis=1)
df_grouped = df_trun.groupby([hyp_key_ren, "Round Id", "Data"]).max().reset_index()
if data_idx == len(graph_names) * len(graph_attrs):
legend = True
else:
legend = False
ax = seaborn.tsplot(time=attr, value="LP MAP",
unit="Round Id", condition="Method", legend=legend,
data=df_grouped, ax=axarray1[plot_idx[0], plot_idx[1]])
if legend:
ax.legend_.remove()
if not plot_idx[1]:
ax.set_ylabel(graph_short[graph])
if plot_idx[1]:
ax.set_ylabel('')
if plot_idx[0] < len(graph_names) - 1:
ax.set_xlabel('')
attr_values = df_grouped[attr].unique()
l_diff = attr_values[-1] - attr_values[-2]
f_diff = attr_values[1] - attr_values[0]
l_f_diff_r = l_diff / f_diff
if l_f_diff_r > 1:
log_base = pow(l_f_diff_r, 1.0 / (len(attr_values) - 2))
ax.set_xscale('log', basex=round(log_base))
marker = ["o", "s", "D", "^", "v", "8", "*", "p", "1", "h"]
for line_i in range(len(ax.lines)):
ax.lines[line_i].set_marker(marker[line_i])
for col_idx in range(axarray1[3].shape[0]):
box = axarray1[3][col_idx].get_position()
axarray1[3][col_idx].set_position(
[box.x0,
box.y0 + box.height * 0.1,
box.width,
box.height * 0.9]
)
fin1.legend(loc='lower center', bbox_to_anchor=(0.45, -0.01),
ncol=len(methods), fancybox=True, shadow=True)
fin1.savefig(
'benchmark_individual3.pdf',
dpi=300, format='pdf', bbox_inches='tight'
)
plt.show()
#Path for the stored .h5 result
path = '/Users/Bench_files/new_files/'
plot_benchmark(
["social", "biology", "internet"],
["N", "dim", "deg"],
{"N": 4096, "deg": 8, "dia": None, "dim": 128},
["gf", "rand", "pa", "lap", "hope", "cn", "aa","sdne"],
["watts_strogatz_graph", "barabasi_albert_graph", "powerlaw_cluster_graph", "random_geometric_graph",\
"duplication_divergence_graph","hyperbolic_graph","r_mat_graph","waxman_graph","stochastic_block_model",\
"stochastic_kronecker_graph"],
s_sch='rw'
)
plot_benchmark_individual(
["social", "biology", "internet"],
["N", "dim", "deg"],
{"N": 4096, "deg": 8, "dia": None, "dim": 128},
["gf", "rand", "pa", "lap", "hope", "cn", "aa", "sdne"],
["watts_strogatz_graph", "barabasi_albert_graph", "powerlaw_cluster_graph", "random_geometric_graph",\
"duplication_divergence_graph","hyperbolic_graph","r_mat_graph","waxman_graph","stochastic_kronecker_graph"],
{"watts_strogatz_graph": "WS", "barabasi_albert_graph": "BA", \
"powerlaw_cluster_graph": "PC", "random_geometric_graph": "RG",\
"duplication_divergence_graph": "DD", "hyperbolic_graph": "HB",\
"r_mat_graph": "RM", "waxman_graph":"WM","stochastic_block_model":"SBM", "stochastic_kronecker_graph": "KG"
},
s_sch='rw'
)
Total running time of the script: ( 0 minutes 1.366 seconds)